Healthcare Bookkeeping Services That Reconcile Every Payer

Insurance deposits rarely match what you billed. We reconcile payments against the claims behind them, age receivables by payer, and close your books on a fixed monthly calendar. Built for solo physicians, independent clinics, and multi-provider groups across nearly every specialty.

QuickBooks Certified ProAdvisor, Elite tierIRS Certifying Acceptance Agent
4.5
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TrustScore 4.3
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4.4
Serving businesses since
2006Serving businesses since
Businesses served
5000+Businesses served
on Google
4.4/5on Google
Industries served
15+Industries served

The Problem

  • Payer Deposits, No Detail

    A payer deposit lands as one lump sum with nothing tying it to its claims.

  • Vanishing Denials

    Denials, contractual adjustments, and write-offs disappear into revenue instead of being tracked.

  • Provider Numbers Nobody Fully Trusts

    Provider draws, distributions, and productivity live in one spreadsheet that nobody on the team trusts.

What You Get

  1. 01

    Payments reconciled to EOBs and ERAs, with denials and adjustments recorded separately

    Every deposit tied to its claims.

  2. 02

    Insurance AR aged by payer, with days in AR

    Net collection rate shown per payer contract.

  3. 03

    Revenue and margin by service line and provider

    Know which services and sites actually fund the practice.

  4. 04

    Physician draws, partner distributions, and payroll for clinical schedules

    Equity detail your CPA needs at K-1 time.

What We Deliver

Scope is set per practice. Most practices start with payer reconciliation and the monthly close, then add provider reporting and tax once the books are fully current.

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  1. Payer reconciliation

    ERAs and EOBs matched to claims, adjustments posted, AR aged by payer

    Monthly

  2. Bookkeeping

    Categorized transactions, bank and card reconciliations, AR and AP tracking

    Monthly

  3. Financial statements

    Profit and loss, balance sheet, cash flow, by location and consolidated

    Monthly

  4. Provider reporting

    Collections, adjustments, and margin by provider and service line

    Monthly

  5. Cleanup and catch up

    Prior period reconciliation, chart of accounts rebuild, opening balances

    One time

  6. Payroll support

    Payroll journal entries, on-call and per diem coding, reconciliation

    Per pay run

  7. Tax preparation

    Federal and state returns prepared for your review

    Annual

THE GROWTH SCORE

See cash clearly through the claims lag.

Insurance payments arrive weeks after care is given. Growth Score tracks what's owed, what's collected and what it means for cash, so a slow payer never becomes a payroll problem.

  • Days to collect: reimbursement speed by month.

  • Revenue per provider: is each new hire paying for themselves?

  • Cash runway: covered payroll, even when payers are slow.

Included on the Growth plan and above.

Growth Score Demo

How It Works

Sign the BAA

We sign a BAA, arrange encrypted transfer, and restrict access to assigned staff.

Reconcile Payments and Close Monthly

ERAs are matched to claims, then books close on a fixed date.

Map Billing Data

We connect billing reports to a chart of accounts coded by payer and provider.

Review and Report

A CPA reviews first, then AR by payer and provider reports reach you.

Software We Work In

QuickBooksXeroSageOracle NetSuiteTebraathenahealthAdvancedMDDrChronoeClinicalWorksNextGenEpicSimplePracticeWebPTQuickBooksXeroSageOracle NetSuiteTebraathenahealthAdvancedMDDrChronoeClinicalWorksNextGenEpicSimplePracticeWebPT

What our 5000+ clients say about Monily

Why partner with Monily

Accounting, tax and CFO support under one roof, from a team that has done this since 2006.

Experts on Your Books

  • Certified accountants and QuickBooks Elite ProAdvisors
  • A dedicated success manager who knows your account
  • Teams across the US, Canada, the UK, the UAE and Pakistan
  • Questions answered by people, usually the same day

Built to Grow With You

  • Monthly financials delivered on schedule
  • Bookkeeping, tax, payroll and CFO support in one place
  • Works in the tools you already use
“Monily was great to work with. They understood the requirements quickly and delivered high-quality results without any issues. Their professionalism and reliability made the whole process smooth and stress-free. I’m very satisfied with the outcome and would be happy to hire them again for future projects.”
Charli Leger

01 — 03

Pricing and what moves it

We offer custom pricing for healthcare practices looking to outsource their bookkeeping to Monily. Your volume, the number of payers, and the number of locations and entities you run are what determine your pricing. Any catch-up work is quoted separately as a one-time project.

Frequently
Asked Questions

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Monily combines expert financial support, personalized service, and reliable reporting to simplify your finances, improve financial clarity, and help you make informed business decisions.

Healthcare Bookkeeping, Explained

We sign a business associate agreement before onboarding. Files move through an encrypted client portal or email, never consumer messaging apps. Access is limited to assigned staff and is logged.

Bookkeeping for healthcare looks ordinary until the first payer deposit arrives. A single electronic funds transfer can cover forty claims, three dates of service, two providers, and a handful of denials, and none of that detail reaches the bank feed. The work below closes that gap.

Your practice management system records charges at your full fee schedule. Your bank records a net deposit several weeks later. Between them sit allowed amounts, adjustments, denials, patient responsibility, and recoupments, and most practices never reconcile them. Revenue then looks larger than it really is.

We reconcile deposit by deposit, matching each ERA to its claims and posting adjustments separately. Your income statement shows revenue you expect to keep.

A denial nobody records is a denial nobody works. We track denied and underpaid claims as separate categories, so your billing team knows what to appeal and you know what unappealed claims cost.

Contractual adjustments stay separate from bad debt write-offs, since the first is the price of being in a network and the second is a collections problem. Over a few cycles this gives you net collection rate by payer, which shows whether a contract is worth renewing. Co-pays, deductibles, coinsurance, and payment plans are tracked as patient responsibility, so front desk collection is measured.

Aging by payer shows exactly who is late and whether that is normal. We flag claims nearing timely filing limits, where a slow claim becomes a permanent loss.

A practice can be profitable on paper and still come up short in a payroll week, because money arrives on the payer's schedule rather than yours. We build a cash view around your payer mix and historical days in AR to show what is realistically landing over the next several weeks, apart from self-pay balances and patient payment plans. Fixed obligations such as rent, equipment leases, and provider draws are set against it.

Healthcare payroll carries variables generic support ignores, such as on-call shifts, per diem coverage, split clinical and administrative roles, and locum arrangements, all of which need correct coding before labor cost means anything. Supplies, lab costs, and equipment depreciation belong in categories that match how you buy them.

Credentialing and licensing costs are tracked by provider, so the cost of each clinician stays visible to you.

Once revenue is coded by rendering provider and service line, useful questions become answerable. Which panel generates collections rather than charges. Is an ancillary service covering its staff. We report collections and margin by provider, service line, and location, and can map production against wRVU if you track them. Groups use it for compensation.

Owner pay in a practice is rarely one salary line. Draws, guaranteed payments, distributions, and year-end true-ups each need separate tracking if the tax return is going to make sense. We keep them clean through the year and maintain the equity detail your CPA needs at K-1 time, ready for 1065, 1120S, 1120, or Schedule C.

Practice management systems are built to submit claims and post payments. Accounting systems are built to produce financial statements. Nothing joins them by default, and the manual bridge between the two is where most books go wrong. That bridge is the service.

Coding always stays with your team. CPT and ICD-10 selection is a clinical decision, and we work from the superbill, charge entry, and payment posting your billing operation produces rather than second-guessing it. If your system exports payment, adjustment, or AR detail, we reconcile it to your ledger every single month.

Primary care and family medicine, specialty clinics, dental groups, behavioral health and therapy practices, physical therapy and chiropractic clinics, veterinary hospitals, med spas, home health agencies, imaging centers, and multi-site provider groups. Payer mix differs in each.

We report by location and consolidated in the same close, so sites can be compared on collections, payer mix, and labor cost. Groups running separate practice, management, and real estate entities are handled the same way, with each entity kept on its own separate books and consolidated reporting across all of them, so every return stays clean at tax time.

Ready for Healthcare Bookkeeping That Fits Your Practice?

Book a free consultation and we will map out your payers, your systems, and your reporting cadence. If your books are behind, we quote the catch up before anything else starts.

Schedule a free consultation with our C-level experts today.

Know More. Grow More.

4.5
Rated on Clutch
Trustpilot
TrustScore 4.3
Google Reviews
4.4